sha256 stringlengths 64 64 | language stringclasses 28
values | size int32 1 491k | lines int32 1 23.2k | content stringlengths 1 200k |
|---|---|---|---|---|
0c638e256e562d95986f2ed026f7e72cf8bec043ebc0c57c6928ebcbb96421a6 | Shell | 578 | 17 | #!/bin/bash
mkdir -p ~/.ssh
echo -e "Host localhost\n\tStrictHostKeyChecking no\n\tIdentityFile /tmp/dl-test-ssh-id\n" >> ~/.ssh/config
echo -e "Host datalad-test\n\tStrictHostKeyChecking no\n\tIdentityFile /tmp/dl-test-ssh-id\n" >> ~/.ssh/config
ssh-keygen -f /tmp/dl-test-ssh-id -N ""
cat /tmp/dl-test-ssh-id.pub >> ~... |
a1c68a7fa42afe5ff041aaa28eb91e98001e495043e0531089aca75203591472 | Shell | 580 | 28 | #!/bin/bash
# From https://git.fmrib.ox.ac.uk/fsl/fsleyes/fsleyes/-/blob/master/.ci/zenodo_deposit.sh
tmp=`dirname $0`
pushd $tmp > /dev/null
thisdir=`pwd`
popd > /dev/null
zenodo_url=$1
zenodo_tkn=$2
zenodo_depid=$3
version=`git tag`
upfile=`pwd`/nifti_mrs_specification_*.pdf
metafile=`pwd`/.github/workflows/zenod... |
7e48b2126241ca2aeed26217bc3e1b916d86dda98d0ccb1b9e47b2ac6ae492e9 | Shell | 581 | 20 | #!/bin/bash
mkdir -p ~/.ssh
echo -e "Host localhost\n\tStrictHostKeyChecking no\n\tIdentityFile /tmp/dl-test-ssh-id\n" >> ~/.ssh/config
echo -e "Host datalad-test\n\tStrictHostKeyChecking no\n\tIdentityFile /tmp/dl-test-ssh-id\n" >> ~/.ssh/config
ssh-keygen -f /tmp/dl-test-ssh-id -N ""
cat /tmp/dl-test-ssh-id.pub >> ~... |
1b5cca72363bd16efd5e5d733ddad8747ac3850a9a2f234066e1ef60e2a311eb | Shell | 595 | 20 | #!/bin/bash
#export EXPERIMENTS=/home/lukovic/data/treenet/experiments
#export DATA=/storage/lukovic/Data/FORWARDS/treenet/tfrecords/
EXP_DESC="test_GPU_node05_1"
python3 ~/codes/treenetai/training.py \
--timeseries_label \
--proj_name 'TNT-climate-data' \
--experiment_type 'climate-processing' \
--exp_descr... |
878897ef14d9dff28209ede2749399b5089ee0380e680afc7f1325b897b95884 | Shell | 604 | 31 | #!/bin/sh
# test the various restartable loaders
# gif, webp and ppm use streams, but they mmap the input, so you can't close() the
# fd on minimise
# set -x
set -e
. ./variables.sh
if test_supported jpegload_source; then
./test_descriptors $image
fi
if test_supported pngload_source; then
./test_descriptors $te... |
887250f060e4d62708068769caa8fd31b00bc3bcb1feaaaa40a1f6a5e9e876df | Shell | 611 | 26 | #!/bin/bash
set -ex
# Activate conda environment
source activate conda_env
# Change to job directory
cd stage_jobdir
# Run scripts to prepare for the batch-job
python prepare_stagejob.py --input_json stage_job_config.json
# Copy modfiles
if [ -d modfiles_dir ]; then cp -r modfiles_dir stage_jobdir; fi
# Compile me... |
761314c14b3c48f33a6139616ad2b1e5b55cd25873ec8cea1fd2b229e16f257e | Shell | 617 | 12 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name SHAP_best_mocc6
#SBATCH --gres gpu:1
#SBATCH -o ../../../.results/SHAP_best_mocc6.out
cd ../../..
source venv/bin/activate
python misc/saliency.py \
--model enetb2 \
--test_ckpt_path "../.results/bsz32-lws1-resize-by-model-oriental-museum-['inst... |
7ffc75f4e8fdca40dfaa020bfc1227bd9df459692ca1fd567d4963b368ab6edb | Shell | 623 | 8 | #!/usr/bin/env bash
set -x
set -e
if [ ! -e test_data ]; then
mkdir test_data
wget http://openneuro.outputs.s3.amazonaws.com/091b91a257f6b517790f2fb82a784c8e/3e22d7c1-c7e8-4cc7-bfdd-c89dd6681982/fmriprep/sub-01/func/sub-01_task-rhymejudgment_bold_space-MNI152NLin2009cAsym_preproc.nii.gz -O test_data/sub-01_task-rhy... |
160724e5727b54e985812309ca7bfcd3008c7105787adc7bcf88434e03578d7e | Shell | 627 | 15 | #!/bin/bash
# This script assumes that the submodules have already been init-ed
# Update each submodule to the remote-branch specified in .gitmodules
git submodule update --remote
# Also update some nested submodules
SUBMODULE_DIR=../lib/pico-sdk
if [[ -d $SUBMODULE_DIR ]] && [[ -f $SUBMODULE_DIR/.gitmodules ]]; then
... |
69cc871afb26099f85d9fdda81be0caec1131b27f92a8c73908ab07766915218 | Shell | 629 | 12 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name saliency_best_mocc6
#SBATCH --gres gpu:1
#SBATCH -o ../../../.results/saliency_best_mocc6.out
cd ../../..
source venv/bin/activate
python misc/saliency.py \
--model enetb6 \
--test_ckpt_path "../.results/bsz32-lws1-resize-by-model-oriental-museu... |
04044bfa4db8031482677ab0605d5d142882d2129ef6b27123d4e74a886b0162 | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-4-inceptionv4
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-inceptionv4.out
cd ../../../..
source venv/bin/activate
pytho... |
3838ab93e684b94b1f84072f0e4344a3ea351c6cb731315312c16d184231f06d | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-6-inceptionv3
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-inceptionv3.out
cd ../../../..
source venv/bin/activate
pytho... |
4c5d4e37d23d3f264690e534027d5b9a3fc5f5a551a7423478b255e30ac6761e | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-3-inceptionv4
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-inceptionv4.out
cd ../../../..
source venv/bin/activate
pytho... |
5908a8ac2683998ee26f23037e13d8ab62ea32a0c2fff804aad3c302a13e538a | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-5-inceptionv3
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-inceptionv3.out
cd ../../../..
source venv/bin/activate
pytho... |
6b88195975dc98a5af7663453d89016713b5a195675446f0a5f777705cef7aae | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-6-inceptionv4
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-inceptionv4.out
cd ../../../..
source venv/bin/activate
pytho... |
6b89b6a9fd4d30f24718a9da1f4388125f1ad6f4d3d4f1a4ca8f22c8986b7966 | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-5-inceptionv4
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-inceptionv4.out
cd ../../../..
source venv/bin/activate
pytho... |
a7f274baa0d819ed2cce7b6e47ac33f7a3421d96d39a080a66bb608cd76fc2d6 | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-4-inceptionv3
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-inceptionv3.out
cd ../../../..
source venv/bin/activate
pytho... |
aa0c019c9a38e8506cf131f82e0da85253fc94214fd2da9b23a18d7e20bcf0a6 | Shell | 639 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-3-inceptionv3
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-inceptionv3.out
cd ../../../..
source venv/bin/activate
pytho... |
ff631ae9855fcb6e97b329e19d8b8238c4de08dac205352140bf83b1619d2a3b | Shell | 643 | 16 | #!/bin/bash
if [ -e "$1" ]; then
file="$1"
else
echo 'CANNOT FIND LOG FILE'
exit 1
fi
echo "Downloaded submissions: $( grep -c 'Downloaded submission' "$file" )"
echo "Failed downloads: $( grep -c 'failed to download submission' "$file" )"
echo "Files already downloaded: $( grep -c 'already exists, contin... |
1ac433ff8ede2ea7e9617426386b1fa614542068b98ed7b9449c9f3a51db323f | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb4.out
cd ../../../..
source venv/bin/acti... |
46217af4a87a15a262292baa97f4e2ba478157c250ec1a81015e8b3cdda82f82 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb6
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb6.out
cd ../../../..
source venv/bin/acti... |
4f3c691870a91e35249374b37acf09978a6566d6b00ebfce86ca39ccdcec58f9 | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb4.out
cd ../../../..
source venv/bin/acti... |
521822233c2a77908437b40545cdfd538b037a8e64f3ef37a6178f9bfdc21c73 | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb5.out
cd ../../../..
source venv/bin/acti... |
5f61ae44985136ad0ec0d6639e35e5737c096501dbcec93c1042c37be6daee69 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb6
#SBATCH --mem 16G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb6.out
cd ../../../..
source venv/bin/act... |
6e5888183cfe69109e60c550d27fbc6bc9cbdad1d41ce89d4c31dfae8b2ebb05 | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb5.out
cd ../../../..
source venv/bin/acti... |
7ccee665896ed9c90546dd96393d08336cc98370b73acaa3542a837bf579fbf7 | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb5.out
cd ../../../..
source venv/bin/acti... |
89234fce84d3194ff464227765aeb0d0598f4ee2d207280cdf6c5a951efc869e | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb4.out
cd ../../../..
source venv/bin/acti... |
97e05f73747911570a9aeb97ff2ce60b3fc8f902562fa9a7cab563f6039f01a2 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb7
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb7.out
cd ../../../..
source venv/bin/acti... |
9b8d5a8fbefc05c05cf352c24feb8ed23ee5a77edf2fb3cce133cc64620b1093 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb7
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb7.out
cd ../../../..
source venv/bin/acti... |
be7f2eb0a9a0178ed4a1903b76304413fb14b063400da17f1dcce047a3d86992 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb6
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb6.out
cd ../../../..
source venv/bin/acti... |
c7679a7a86df8994ead43b681e3f9ae353c3c877071e8ca18388420dc27ae255 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb6
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb6.out
cd ../../../..
source venv/bin/acti... |
e4f36ebd93094258330291a01d638e19062ac25efbb2902f65dbc1f05c196621 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb7
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb7.out
cd ../../../..
source venv/bin/acti... |
e82e65bb02a023a616331f35dd116608deb1e468a1fa9d93b729ba94e18afabf | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb5.out
cd ../../../..
source venv/bin/acti... |
eaaf307f3d34a772bde4df0040d600688d87e407618cc2c95c65944b8cef6ce7 | Shell | 644 | 14 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH -x gpu[0-8]
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb7
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb7.out
cd ../../../..
source venv/bin/acti... |
f4e9d78318734499acc59b8da9b6738974df586ca7f19c1f73ebd058eced57c3 | Shell | 644 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-8]
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb4.out
cd ../../../..
source venv/bin/acti... |
0e375b7cc268a17ee97a6b7d0ee600003528ba690121eafad6a3a377105e5c90 | Shell | 645 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH -x gpu[0-8]
#SBATCH --mem 12G
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb3.out
cd ../../../..
source venv/bin/act... |
1fc426a0ec4383107c3f1ed4968e83fde3749b0c224b53efd55d9ab85fed25c3 | Shell | 645 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-4-resnet_rs_101
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
p... |
4c2d99bacf433fd3a9583b03e242ac1a5e26cc7a9bc4ea5949cb3c486069f231 | Shell | 645 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH -x gpu[0-8]
#SBATCH --mem 12G
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb3.out
cd ../../../..
source venv/bin/act... |
6baa336a8acea7adbca9efdc6f9f19ddc2f87ff2c77e05d566907f2123dbbc1f | Shell | 645 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-6-resnet_rs_101
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
p... |
85ce0cac423bfc60929c08a650238718181cfa4592b64cfaf5c596c014f48870 | Shell | 645 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-5-resnet_rs_101
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
p... |
cc9ac6942d76e7ad25dfd2e0e4f0dfcb52701ffd30a6e930ee04943742cb6545 | Shell | 645 | 13 | #!/bin/bash
#SBATCH -N 1
#SBATCH -p res-gpu-small
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --qos short
#SBATCH --job-name om-i-resize-by-model-mocc-3-resnet_rs_101
#SBATCH --mem 8G
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
p... |
f550877a5a2cf114f02cf843a3a0289d15afd63965e1c6d8e01516092cfa6085 | Shell | 645 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH -x gpu[0-8]
#SBATCH --mem 12G
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb3.out
cd ../../../..
source venv/bin/act... |
fb3525d4683af55e3ee1e413d06cafb7c4bfc43304b11bb2fc1eee82db913e85 | Shell | 645 | 14 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH -x gpu[0-8]
#SBATCH --mem 12G
#SBATCH -p res-gpu-small
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb3.out
cd ../../../..
source venv/bin/act... |
38d4fe3ccedf66ee672e90e2b716a14ffe423e58e3d9662a29dc7dc801fe190d | Shell | 664 | 12 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name feats-gen_best_mocc5
#SBATCH --gres gpu:1
#SBATCH -o ../../../.results/feats-gen_best_mocc5.out
cd ../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --feats_gen \
--model enetb4 \
--test_ckpt_path ".results/bsz32-lws1-r... |
a5e94e8a28ed02ae1ebfbd880d1577f131cb910cc23e0679fa754bc10cdb6aac | Shell | 664 | 12 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name feats-gen_best_mocc3
#SBATCH --gres gpu:1
#SBATCH -o ../../../.results/feats-gen_best_mocc3.out
cd ../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --feats_gen \
--model enetb6 \
--test_ckpt_path ".results/bsz32-lws1-r... |
c4d29b45c0bee4fbd1e2215b1e3ffd1f5a65b902aa7eea1d8bf193ff5e7f2a4a | Shell | 664 | 12 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name feats-gen_best_mocc4
#SBATCH --gres gpu:1
#SBATCH -o ../../../.results/feats-gen_best_mocc4.out
cd ../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --feats_gen \
--model enetb3 \
--test_ckpt_path ".results/bsz32-lws1-r... |
b3f84870a3a6cd6923eb80ff335e32e3195515d6a0e1473f3557321befc62941 | Shell | 679 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb6
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb6.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb6 --dataset=oriental-museum --d... |
bc93a89c6da59342e22e00989c5ace517239206c6eb8e12f8e1738bfcafac1a3 | Shell | 679 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb7
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb7.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb7 --dataset=oriental-museum --d... |
ddbc188a887c18df87f5e89f2eefbb16ae9ccf980ca20ffc84874840c2ce79c0 | Shell | 684 | 18 | #!/bin/bash
# Gokberk Alagoz
# This script will...
# After converting ancestry regressed Rdata sumstats to txt format,
# A1.x, A2.x, CHR.y colnames must be corrected before munging.
# Also, ancBETA column should be moved to 5th field and overwrite BETA column,
# so that ancestry regressed BETA values are used for LDS... |
d64ce9e94a525bf02ce9793a8af8eff443fdd39f20d6cbce74dd1e07d2d96f17 | Shell | 692 | 22 | # This script use a trained model to generate a video
# it streches the output to 640x360px
if [ "$#" -ne 4 ]
then
echo "arg 1 is for the model path, should contain a checkpoint"
echo "arg 2 is the name of initial image .jpg"
echo "arg 3 is for the number of recursion"
echo "arg 4 is for video path/nam... |
57541d3b3442a0ae1b7c4765b39fd41d55181538a3b48d31ac380e339224a185 | Shell | 693 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb7
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb7.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb7 --dataset=oriental-museum --d... |
60c07cfff4d02f854f9285bffc163fb8740c17a51673364f0ede1d72d6720c58 | Shell | 693 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb7
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb7.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb7 --dataset=oriental-museum --d... |
6ceb1d785852961806ab667441d553c5be71621e4abacce9b52b740d83e0bfda | Shell | 693 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb6
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb6.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb6 --dataset=oriental-museum --d... |
80fb52fbc27424d43d58f34c50a020d0702568cb05f2233a4d755089699767bf | Shell | 693 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb6
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb6.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb6 --dataset=oriental-museum --d... |
8d031ab7c42e8cae408f134250f1e13746988ca24d119642fd95d163ac657dbb | Shell | 693 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb7
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb7.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb7 --dataset=oriental-museum --d... |
994d3228c09da22dccb098f45a4f52a025ccc51867bb897a3bfca1322ffcf12f | Shell | 693 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb6
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb6.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb6 --dataset=oriental-museum --d... |
138a2883d1bae9b84647430a6a938d0219ebc0bba67d038cc01b966c4205b7fa | Shell | 694 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb5.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb5 --dataset=oriental-museum --d... |
456c27a8cbe47bcf254fab07044c752b4313a50e977d9d1dc47891ca756200ce | Shell | 694 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb5.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb5 --dataset=oriental-museum --d... |
616ae70771ad6f7c129ee4cc3602fe80b7a9a581aedbfd1c9e3e79459b5d194b | Shell | 694 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb5.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb5 --dataset=oriental-museum --d... |
b128af75247276220625ae047770732f26cf20d33c064e46573c809251b500e6 | Shell | 694 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb5
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb5.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb5 --dataset=oriental-museum --d... |
026e40cf8a8a7508e1e87b3eeefe5e870bd54ac11a6e7a5c4165841a910b83d0 | Shell | 695 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb4 --dataset=oriental-museum --d... |
2ff39d2f134f69155275bf4c76ccd85d19d0650cc1f32145ca13c8d873795b80 | Shell | 695 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb4 --dataset=oriental-museum --d... |
310c929bc7e98ddf0d2af00dee526bf84a9f7581c4f9f84992503cff828473a4 | Shell | 695 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb4 --dataset=oriental-museum --d... |
5548489fdd64a675c4be3ad269fd0ac2e62a1b251b033bc2355c3d1332dbb431 | Shell | 695 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb4 --dataset=oriental-museum --d... |
06977cabc757cb8d09371044293ce418909becddb6256ac0d992017cb114a346 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb0
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb0.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb0 --dataset=oriental-museum --d... |
1bd91d339ea08303c4d6db29668186f60c0758c49efd48454f76240e796f6245 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb2
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb2.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb2 --dataset=oriental-museum --d... |
26d9a3b815c019aee0a0f3956682fa812299642fc28c6d93c27c7dcf05303869 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb0
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb0.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb0 --dataset=oriental-museum --d... |
3a1f4d6a525134c5cde0c31e04a54ba8b3f2e7c65e090e357235e840b4e476a8 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb3 --dataset=oriental-museum --d... |
4ee56b6f78eb245ee3f33825a0b91065564e0f65eb05e2f36e9732eeb4b4da88 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb2
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb2.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb2 --dataset=oriental-museum --d... |
5406739e70c2540211703c5c1339b5532c9177fa920748d12acce3689e63242e | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb0
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb0.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb0 --dataset=oriental-museum --d... |
62a5ab49457ed3d531aa79ebca1b7f2acba400ff8cb7569e9e2f5dc4411b4586 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb0
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb0.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb0 --dataset=oriental-museum --d... |
873f845da3be498346ab7098fdf3ba523a7c0f7871d50dc40d9643ec319a86e5 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb2
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb2.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb2 --dataset=oriental-museum --d... |
912a9bf8a1fdca47dc0697c77d40a406e7056de91077fae8ef3c7f6e224ad4c4 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-enetb1
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-enetb1.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb1 --dataset=oriental-museum --d... |
96eb995d55201804137e25d9cf0fb8c1feee389b641813a6fc9d61c7be8489fe | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb3 --dataset=oriental-museum --d... |
abb7bc027a67dffced059685de0361deec92d63603b1946cfc2371b804f34c5b | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb1
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb1.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb1 --dataset=oriental-museum --d... |
b54fa5ba37a1039536dc50c2efc6c2e9d77286b5f349192681dc638f85c6fbf0 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb2
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb2.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb2 --dataset=oriental-museum --d... |
b7ac5549db51736d74e06f711fb401367e3cd6f2491b4d5d39c4afe5483e1c69 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb3 --dataset=oriental-museum --d... |
c0b3d573a76e4e35151a74151a67018046b2afbfbe4f00bbe348a29d141c2b06 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-enetb3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-enetb3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb3 --dataset=oriental-museum --d... |
cdf150cdcc00d9579e1ecafedf0d332164b6703d2e5a607b35d105ce628ba2e7 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-enetb1
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-enetb1.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb1 --dataset=oriental-museum --d... |
f199a305c58476aaa999d38b63e32a195d30300a416140ac8055d9ec50008036 | Shell | 696 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-enetb1
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-enetb1.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=enetb1 --dataset=oriental-museum --d... |
72b8939b421a8b76584d827586654f2c976da583d3b7b02c6440790c790c989b | Shell | 702 | 17 | #!/bin/bash
#SBATCH --qos short
#SBATCH -N 1
#SBATCH -c 4
#SBATCH -t 2-00:00
#SBATCH --mem 8G
#SBATCH -x gpu[0-6]
#SBATCH -p res-gpu-small
#SBATCH --job-name IG_best_mocc6
#SBATCH --gres gpu:1
#SBATCH -o ../../../.results/IG_best_mocc6.out
cd ../../..
source venv/bin/activate
python misc/saliency.py \
--model enetb... |
0e26beb7c30d36e316f22bcb09303bac9016b8fa92ffbd117f065af10abbdb03 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-inceptionv3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-inceptionv3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv3 --dataset=orie... |
199c604e71a6beeeb97421670869889331a8cbead9ebfb39be67af1a8e44c85f | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-inceptionv3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-inceptionv3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv3 --dataset=orie... |
6ff0b16268e23e4a894f667cecb2a5726f2a6ad4f79db2c6abf22cc42e511829 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-inceptionv3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-inceptionv3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv3 --dataset=orie... |
88e28443ebd60b0cda3531968a0c3f4a0adc7ae42051e937c3cd4f634f253491 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-inceptionv3
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-inceptionv3.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv3 --dataset=orie... |
91b8e69fbd857e459a3bab9762c8d8b06a617cbc40bed2871d9eb168f76cd3a1 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-inceptionv4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-inceptionv4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv4 --dataset=orie... |
c2ffa052c5768509209fed733a7e1ff69bf7675fa40dfcc442acca75e5708ad3 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-inceptionv4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-inceptionv4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv4 --dataset=orie... |
dc4f97d20207f37b283daad1ff1d4b577396acb1f96e5faf643af8a71c749c58 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-inceptionv4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-inceptionv4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv4 --dataset=orie... |
dcd28a6087ed58896171390f8c7759e1e562635d5d6239991fa3ab461d1c9cd4 | Shell | 716 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-inceptionv4
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-inceptionv4.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=inceptionv4 --dataset=orie... |
042a55ae4a210fa4db050e6f5b0eb9778abdf1429b57248a329d726a9dfe895e | Shell | 724 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-4-resnet_rs_101
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-4-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=resnet_rs_101 --datase... |
48164a48934a1f83824533f1a129c34dbfce698843a6a494ddfc7d123f09b62e | Shell | 724 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-5-resnet_rs_101
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-5-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=resnet_rs_101 --datase... |
6af2d3c9245788ccacd0dfe3057aeabcc52705dc2f16d909c225f42d9bdf6004 | Shell | 724 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-3-resnet_rs_101
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-3-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=resnet_rs_101 --datase... |
c3aeac37315268cd1e88c85269cf91170f772e355bfa4091519094d68080b7c4 | Shell | 724 | 10 | #!/bin/bash
#SBATCH --ntasks 6
#SBATCH -p part0
#SBATCH --job-name om-i-resize-by-model-mocc-6-resnet_rs_101
#SBATCH --gres gpu:1
#SBATCH -o ../../../../.results/om-i-resize-by-model-mocc-6-resnet_rs_101.out
cd ../../../..
source venv/bin/activate
python main.py --lr=-4.8 --optimiser=Adam --model=resnet_rs_101 --datase... |
418b57b83a557b249c7f107efe259a321e2d0f16c76d9e79ff1c6756d7023c44 | Shell | 726 | 20 | #!/usr/bin/env bash
set \
-o errexit \
-o nounset \
-o pipefail
if [ ! -f GSE155178_maize_scATAC_atlas_ACR_celltype_CPM.txt ]; then
wget "https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE155178&format=file&file=GSE155178%5Fmaize%5FscATAC%5Fatlas%5FACR%5Fcelltype%5FCPM%2Etxt%2Egz" -O GSE155178_maize_scATAC_at... |
b7ab37f1f684253177dd5c0475dc2713e4bc517b84e23575ff36a3550abe8055 | Shell | 726 | 14 | #$ -N AncestryRegression
#$ -cwd
#$ -q single15.q
#$ -S /bin/bash
#-----Ancestry Regression-----
# Using a standard multivariable regression implemented in R with the lm() function, we regress
# the GWAS summary statistics prior to ancestry regression (Beta_strat) with the ancestry
# PCs (Beta_PCs). The residuals of... |
cce0d59f174aeb19799a33ade2699c881df9765ec47504ccd9c43e09233a212d | Shell | 769 | 28 | #!/bin/bash
#
#SBATCH --job-name=rn6
#SBATCH --workdir /share/lasallelab/genomes/
#SBATCH --partition=production
#SBATCH --ntasks=12
#SBATCH --mem=18000
#SBATCH --output=rn6.out # File to which STDOUT will be written
#SBATCH --error=rn6.err # File to which STDERR will be written
#SBATCH --time=0-05:00:00... |
c6539bd92cd625fdae1e7c5c900c9a47e254642224dfea390413d2b0e68c5f21 | Shell | 779 | 28 | #!/bin/bash
#
#SBATCH --job-name=mm10
#SBATCH --workdir /share/lasallelab/genomes/
#SBATCH --partition=production
#SBATCH --ntasks=12
#SBATCH --mem=18000
#SBATCH --output=mm10.out # File to which STDOUT will be written
#SBATCH --error=mm10.err # File to which STDERR will be written
#SBATCH --time=0-05:00... |
cef8bd7ce8664e3d156c4038c2a9be1e254921fc44084d67d2eadf3f099e25af | Shell | 786 | 28 | #!/bin/bash
#
#SBATCH --job-name=hg38
#SBATCH --workdir /share/lasallelab/genomes/
#SBATCH --partition=production
#SBATCH --ntasks=12
#SBATCH --mem=18000
#SBATCH --output=hg38.out # File to which STDOUT will be written
#SBATCH --error=hg38.err # File to which STDERR will be written
#SBATCH --time=0-05:00... |
cf4ada04754bfed3ab5fde5ca54d62d9f5bbdf5f576448d0cda6d3098e011073 | Shell | 790 | 29 | #!/bin/bash
set -ex
nersc_human=/global/project/projectdirs/m2043/AIBS/ani/Optimizations/Human_Cells/running_cells
nersc_mouse=/global/project/projectdirs/m2043/AIBS/ani/Optimizations/Mouse_Cells/running_cells
#echo CELL_ID,SPECIES,STATUS,MACHINE
# Human cells
if [ -d $nersc_human ]; then
cd $nersc_human
for... |
887b664b2f668537d4096a67a85bef5f3d396a6ceb168287135fb108923a4ffa | Shell | 791 | 33 | #!/bin/bash
#SBATCH --time=30:00:00
#SBATCH --job-name=final_CNN
#SBATCH -N 1
#SBATCH --ntasks-per-node=1
#SBATCH -C TitanX
#SBATCH --gres=gpu:1
#SBATCH --output=CNN.Final.ASGD.SBAMBI.%j.out
module load cuda10.1/toolkit
module load cuDNN/cuda10.1
source /home/mdo520/.bashrc
# Base directory for the experiment
cd /va... |
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