Beyond Manual Curation: Augmenting Targeted Protein Degradation Databases via Agentic Literature Extraction Workflows
Paper • 2605.11221 • Published
AutoTPD_ID string | DOI string | Compound_Name string | IUPAC_Name string | IUPAC_Name_Source string | SMILES string | Compound_Key string | SMILES_Source string | Degradation_Target string | Degradation_Target_Gene string | Degradation_Target_Uniprot string | Degradation_Target_Uniprot_MutationID float64 | Degradation_Target_Sequence string | Recruiter string | Recruiter_Gene string | Recruiter_Uniprot string | Recruiter_Sequence string | Assay string | Assay_STD string | Cell_Line string | Cell_Line_STD string | Cell_Line_STD_Accession string | Cell_Line_Modification string | Cell_Line_Species string | DC50 float64 | DC50_units string | DC50_h float64 | DC50_operator string | DC50_range_min float64 | DC50_range_max float64 | Dmax float64 | Dmax_h float64 | Dmax_operator string | Dmax_range_min float64 | Dmax_range_max float64 | Dmax_conc float64 | Dmax_conc_operator float64 | Dmax_conc_range_min float64 | Dmax_conc_range_max float64 | Dmax_conc_units string | Standard_InChIKey string | Standard_InChIKey_Source string | Connectivity_Key string |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AUTOTPD-MG-000001 | 10.1021/acs.jmedchem.3c00851 | 43h | 4-[4-[[[2-[(9S)-7-(4-Chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]acetyl]amino]methyl]-1-piperidyl]-N-(2,6-dioxo-3-piperidyl)-2-fluorobenzamide | null | Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCC1CCN(c3ccc(C(=O)NC4CCC(=O)NC4=O)c(F)c3)CC1)c1nnc(C)n1-2 | NTNMFROSEFWETI-XIJSCUBXSA-N | PAPER | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | CRBN | CRBN | Q96SW2 | MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS... | Western blot densitometry | Western blot | MOLT4 | MOLT-4 | CVCL_0013 | null | Homo sapiens | 4.7 | nM | 24 | null | null | null | 99 | 24 | > | null | null | null | null | null | null | null | NTNMFROSEFWETI-XIJSCUBXSA-N | OPSIN | NTNMFROSEFWETI |
AUTOTPD-MG-000002 | 10.1021/acs.jmedchem.3c00851 | 44h | 4-[4-[[[2-[(9S)-7-(4-Chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]acetyl]amino]methyl]-1-piperidyl]-N-(2,6-dioxo-3-piperidyl)-2-methoxybenzamide | null | COc1cc(N2CCC(CNC(=O)C[C@@H]3N=C(c4ccc(Cl)cc4)c4c(sc(C)c4C)-n4c(C)nnc43)CC2)ccc1C(=O)NC1CCC(=O)NC1=O | BIVJJLVZJPBUMK-XIJSCUBXSA-N | PAPER | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | CRBN | CRBN | Q96SW2 | MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS... | Western blot densitometry | Western blot | MOLT4 | MOLT-4 | CVCL_0013 | null | Homo sapiens | 0.59 | nM | 24 | null | null | null | 99 | 24 | > | null | null | null | null | null | null | null | BIVJJLVZJPBUMK-XIJSCUBXSA-N | OPSIN | BIVJJLVZJPBUMK |
AUTOTPD-MG-000003 | 10.1021/acs.jmedchem.3c00851 | 51 | N-(2,6-Dioxo-3-piperidyl)-4-[[2-[[8-[4-[[7-(hydroxyamino)-7-oxo-heptyl]carbamoyl] anilino]-8-oxooctyl]amino]-2-oxoethyl]amino]-2-methoxybenzamide | null | COc1cc(NCC(=O)NCCCCCCCC(=O)Nc2ccc(C(=O)NCCCCCCC(=O)NO)cc2)ccc1C(=O)NC1CCC(=O)NC1=O | YACBBDOEMCACOF-UHFFFAOYSA-N | PAPER | HDAC6 | HDAC6 | Q9UBN7 | null | MTSTGQDSTTTRQRRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIVGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYI... | CRBN | CRBN | Q96SW2 | MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS... | Western blot densitometry | Western blot | MM.1S | MM1.S | CVCL_8792 | null | Homo sapiens | 5.8 | nM | 24 | null | null | null | null | null | null | null | null | null | null | null | null | null | YACBBDOEMCACOF-UHFFFAOYSA-N | OPSIN | YACBBDOEMCACOF |
AUTOTPD-MG-000004 | 10.1038/s41589-023-01409-z | DS64 | (R)-2-((6-((4,5-difluoro-1H-benzo[d]imidazol-2-yl)methyl)amino)-9-isopropyl-9H-purin-2 yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2nc3c(F)c(F)ccc3[nH]2)c2ncn(C(C)C)c2n1 | DCTODZNTFHJKGP-LLVKDONJSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 62 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | DCTODZNTFHJKGP-LLVKDONJSA-N | PUBCHEM | DCTODZNTFHJKGP |
AUTOTPD-MG-000005 | 10.1038/s41589-023-01409-z | DS18 | N-((5,6-dichloro-1H-benzo[d]imidazol-2-yl)methyl)-9-isopropyl-2-morpholino-9H-purin-6 amine | null | CC(C)n1cnc2c(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)nc(N3CCOCC3)nc21 | DPCUNIIUTMKIKJ-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 13 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | DPCUNIIUTMKIKJ-UHFFFAOYSA-N | OPSIN | DPCUNIIUTMKIKJ |
AUTOTPD-MG-000006 | 10.1038/s41589-023-01409-z | DS19 | 9-isopropyl-2-morpholino-N-(4-(pyridin-2-yl)benzyl)-9H-purin-6-amine | null | CC(C)n1cnc2c(NCc3ccc(-c4ccccn4)cc3)nc(N3CCOCC3)nc21 | LQFDMFLOSFCOEO-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 62 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | LQFDMFLOSFCOEO-UHFFFAOYSA-N | OPSIN | LQFDMFLOSFCOEO |
AUTOTPD-MG-000007 | 10.1038/s41589-023-01409-z | DS21 | 9-(1-methyl-1H-pyrazol-4-yl)-2-morpholino-N-(4-(pyridin-2-yl)benzyl)-9H-purin-6-amine | null | Cn1cc(-n2cnc3c(NCc4ccc(-c5ccccn5)cc4)nc(N4CCOCC4)nc32)cn1 | MQFPSSOXZJCSMW-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 3,124 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | MQFPSSOXZJCSMW-UHFFFAOYSA-N | OPSIN | MQFPSSOXZJCSMW |
AUTOTPD-MG-000008 | 10.1038/s41589-023-01409-z | DS22 | (R)-2-((6-(((5,6-dichloro-1H-benzo[d]imidazol-2-yl)methyl)amino)-9-(1-methyl-1H-pyrazol-4 yl)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2nc3cc(Cl)c(Cl)cc3[nH]2)c2ncn(-c3cnn(C)c3)c2n1 | QUGBKWYKYATQSZ-LLVKDONJSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 109 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | QUGBKWYKYATQSZ-LLVKDONJSA-N | OPSIN | QUGBKWYKYATQSZ |
AUTOTPD-MG-000009 | 10.1038/s41589-023-01409-z | DS24 | (R)-2-((6-((3-fluoro-4-(pyridin-2-yl)benzyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccccn3)c(F)c2)c2ncn(C(C)C)c2n1 | DZJLJYVQLLFULK-QGZVFWFLSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 172 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | DZJLJYVQLLFULK-QGZVFWFLSA-N | OPSIN | DZJLJYVQLLFULK |
AUTOTPD-MG-000010 | 10.1038/s41589-023-01409-z | DS25 | (R)-2-((9-isopropyl-6-((4-(5-methylthiophen-2-yl)benzyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccc(C)s3)cc2)c2ncn(C(C)C)c2n1 | IGJPGKABXPANSO-LJQANCHMSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 90 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | IGJPGKABXPANSO-LJQANCHMSA-N | OPSIN | IGJPGKABXPANSO |
AUTOTPD-MG-000011 | 10.1038/s41589-023-01409-z | DS28 | (S)-2-((9-isopropyl-6-((4-(pyridin-2-yl)benzyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@@H](CO)Nc1nc(NCc2ccc(-c3ccccn3)cc2)c2ncn(C(C)C)c2n1 | HOCBJBNQIQQQGT-IBGZPJMESA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 27 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | HOCBJBNQIQQQGT-IBGZPJMESA-N | OPSIN | HOCBJBNQIQQQGT |
AUTOTPD-MG-000012 | 10.1038/s41589-023-01409-z | DS29 | (R)-2-((6-((3-(3-fluorophenyl)propyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCCCc2cccc(F)c2)c2ncn(C(C)C)c2n1 | CQVNQDCOBDXVMZ-QGZVFWFLSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 253 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | CQVNQDCOBDXVMZ-QGZVFWFLSA-N | OPSIN | CQVNQDCOBDXVMZ |
AUTOTPD-MG-000013 | 10.1038/s41589-023-01409-z | DS30 | (R)-2-((9-isopropyl-6-((3-(m-tolyl)propyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCCCc2cccc(C)c2)c2ncn(C(C)C)c2n1 | IAQVCGQJJMTIMM-GOSISDBHSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 78 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | IAQVCGQJJMTIMM-GOSISDBHSA-N | OPSIN | IAQVCGQJJMTIMM |
AUTOTPD-MG-000014 | 10.1038/s41589-023-01409-z | DS43 | (R)-2-((6-(((1-(3-chlorophenyl)-1H-pyrazol-3-yl)methyl)amino)-9-isopropyl-9H-purin-2 yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccn(-c3cccc(Cl)c3)n2)c2ncn(C(C)C)c2n1 | XQOCHZAMFJBROM-MRXNPFEDSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 75 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | XQOCHZAMFJBROM-MRXNPFEDSA-N | OPSIN | XQOCHZAMFJBROM |
AUTOTPD-MG-000015 | 10.1038/s41589-023-01409-z | DS44 | (R)-2-((9-isopropyl-6-((4-(pyridin-4-yl)benzyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccncc3)cc2)c2ncn(C(C)C)c2n1 | UQRBOMYWGJFNEB-HXUWFJFHSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 62 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | UQRBOMYWGJFNEB-HXUWFJFHSA-N | OPSIN | UQRBOMYWGJFNEB |
AUTOTPD-MG-000016 | 10.1038/s41589-023-01409-z | DS45 | (R)-2-((9-isopropyl-6-((4-(pyridin-3-yl)benzyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3cccnc3)cc2)c2ncn(C(C)C)c2n1 | AXLQKORZTHWACD-HXUWFJFHSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 36 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | AXLQKORZTHWACD-HXUWFJFHSA-N | OPSIN | AXLQKORZTHWACD |
AUTOTPD-MG-000017 | 10.1038/s41589-023-01409-z | DS50 | 2-((9-isopropyl-6-((4-(pyridin-2-yl)benzyl)amino)-9H-purin-2-yl)amino)-N-(2-methoxyphenethyl)acetamide | null | COc1ccccc1CCNC(=O)CNc1nc(NCc2ccc(-c3ccccn3)cc2)c2ncn(C(C)C)c2n1 | FAZBCDJEMSESAO-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 3,569 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | FAZBCDJEMSESAO-UHFFFAOYSA-N | OPSIN | FAZBCDJEMSESAO |
AUTOTPD-MG-000018 | 10.1038/s41589-023-01409-z | DS17 | (R)-2-((6-(((5,6-dichloro-1H-benzo[d]imidazol-2-yl)methyl)amino)-9-isopropyl-9H-purin-2 yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2nc3cc(Cl)c(Cl)cc3[nH]2)c2ncn(C(C)C)c2n1 | NIAQZRDKVVUEMV-LLVKDONJSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 12 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | NIAQZRDKVVUEMV-LLVKDONJSA-N | OPSIN | NIAQZRDKVVUEMV |
AUTOTPD-MG-000019 | 10.1038/s41589-023-01409-z | DS52 | N2-(2-(1H-pyrazol-4-yl)ethyl)-9-isopropyl-N6-(4-(pyridin-2-yl)benzyl)-9H-purine-2,6-diamine | null | CC(C)n1cnc2c(NCc3ccc(-c4ccccn4)cc3)nc(NCCc3cn[nH]c3)nc21 | ZPVLGUHALYPMCR-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 125 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | ZPVLGUHALYPMCR-UHFFFAOYSA-N | OPSIN | ZPVLGUHALYPMCR |
AUTOTPD-MG-000020 | 10.1038/s41589-023-01409-z | DS53 | (R)-2-((6-(([2,4'-bipyridin]-5-ylmethyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccncc3)nc2)c2ncn(C(C)C)c2n1 | NPMNSMOOUPMFMV-GOSISDBHSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 260 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | NPMNSMOOUPMFMV-GOSISDBHSA-N | OPSIN | NPMNSMOOUPMFMV |
AUTOTPD-MG-000021 | 10.1038/s41589-023-01409-z | DS57 | N2-(2-(1H-pyrazol-4-yl)ethyl)-N6-((5,6-dichloro-1H-benzo[d]imidazol-2-yl)methyl)-9-(1-methyl-1H-pyrazol-4-yl)-9H-purine-2,6-diamine | null | Cn1cc(-n2cnc3c(NCc4nc5cc(Cl)c(Cl)cc5[nH]4)nc(NCCc4cn[nH]c4)nc32)cn1 | DKIVKUGXNDYWCX-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 587 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | DKIVKUGXNDYWCX-UHFFFAOYSA-N | OPSIN | DKIVKUGXNDYWCX |
AUTOTPD-MG-000022 | 10.1038/s41589-023-01409-z | DS58 | (S)-N2-(2-(4-(benzyloxy)phenyl)-1-(4H-1,2,4-triazol-3-yl)ethyl)-9-isopropyl-N6-(4-(pyridin-2 yl)benzyl)-9H-purine-2,6-diamine | null | CC(C)n1cnc2c(NCc3ccc(-c4ccccn4)cc3)nc(N[C@@H](Cc3ccc(OCc4ccccc4)cc3)c3nnc[nH]3)nc21 | FKXVDBYFBFHXLL-YTTGMZPUSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 2,020 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | FKXVDBYFBFHXLL-YTTGMZPUSA-N | OPSIN | FKXVDBYFBFHXLL |
AUTOTPD-MG-000023 | 10.1038/s41589-023-01409-z | DS59 | 5-(((9-isopropyl-6-((4-(pyridin-2-yl)benzyl)amino)-9H-purin-2-yl)amino)methyl)-1,3-dimethyl-1H-pyrazole-4-sulfonamide | null | Cc1nn(C)c(CNc2nc(NCc3ccc(-c4ccccn4)cc3)c3ncn(C(C)C)c3n2)c1S(N)(=O)=O | DCNMIIRVWOSZDG-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 566 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | DCNMIIRVWOSZDG-UHFFFAOYSA-N | OPSIN | DCNMIIRVWOSZDG |
AUTOTPD-MG-000024 | 10.1038/s41589-023-01409-z | DS61 | (R)-2-((6-((4-(2-hydroxyethoxy)benzyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(OCCO)cc2)c2ncn(C(C)C)c2n1 | AFLLXNOWMGJTAA-MRXNPFEDSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 917 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | AFLLXNOWMGJTAA-MRXNPFEDSA-N | OPSIN | AFLLXNOWMGJTAA |
AUTOTPD-MG-000025 | 10.1038/s41589-023-01409-z | DS65 | (R)-2-((6-((3-(3,4-dichlorophenyl)propyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCCCc2ccc(Cl)c(Cl)c2)c2ncn(C(C)C)c2n1 | OLTUKTKUEARKCY-OAHLLOKOSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 103 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | OLTUKTKUEARKCY-OAHLLOKOSA-N | OPSIN | OLTUKTKUEARKCY |
AUTOTPD-MG-000026 | 10.1038/s41589-023-01409-z | DS71 | 8-bromo-N-((4,5-difluoro-1H-benzo[d]imidazol-2-yl)methyl)-2-(4-methylpiperazin-1 yl)pyrazolo[1,5-a][1,3,5]triazin-4-amine | null | CN1CCN(c2nc(NCc3nc4c(F)c(F)ccc4[nH]3)n3ncc(Br)c3n2)CC1 | PPZYKPKJVAUJRL-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 4 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | PPZYKPKJVAUJRL-UHFFFAOYSA-N | OPSIN | PPZYKPKJVAUJRL |
AUTOTPD-MG-000027 | 10.1038/s41589-023-01409-z | DS67 | (R)-2-((6-((3-(3-ethylphenyl)propyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CCc1cccc(CCCNc2nc(N[C@H](CC)CO)nc3c2ncn3C(C)C)c1 | ZELMGONKTIAQJA-LJQANCHMSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 219 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | ZELMGONKTIAQJA-LJQANCHMSA-N | OPSIN | ZELMGONKTIAQJA |
AUTOTPD-MG-000028 | 10.1038/s41589-023-01409-z | DS48 | N2-((3,5-dichloropyridin-4-yl)methyl)-9-isopropyl-N6-(4-(pyridin-2-yl)benzyl)-9H-purine-2,6 diamine | null | CC(C)n1cnc2c(NCc3ccc(-c4ccccn4)cc3)nc(NCc3c(Cl)cncc3Cl)nc21 | YENZFYNZBFLBNQ-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 366 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | YENZFYNZBFLBNQ-UHFFFAOYSA-N | OPSIN | YENZFYNZBFLBNQ |
AUTOTPD-MG-000029 | 10.1038/s41589-023-01409-z | DS16 | (R)-2-((6-(([1,1'-biphenyl]-4-ylmethyl)amino)-9-isopropyl-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccccc3)cc2)c2ncn(C(C)C)c2n1 | BRJSFOFBYVFKCP-OAQYLSRUSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 1,029 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | BRJSFOFBYVFKCP-OAQYLSRUSA-N | OPSIN | BRJSFOFBYVFKCP |
AUTOTPD-MG-000030 | 10.1038/s41589-023-01409-z | DS72 | 8-bromo-N-((4,5-difluoro-1H-benzo[d]imidazol-2-yl)methyl)-2-morpholinopyrazolo[1,5-a][1,3,5]triazin-4-amine | null | Fc1ccc2[nH]c(CNc3nc(N4CCOCC4)nc4c(Br)cnn34)nc2c1F | OQEZGFYMQUIYPA-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 6 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | OQEZGFYMQUIYPA-UHFFFAOYSA-N | OPSIN | OQEZGFYMQUIYPA |
AUTOTPD-MG-000031 | 10.1038/s41589-023-01409-z | DS68 | (R)-3-(3-((2-((1-hydroxybutan-2-yl)amino)-9-isopropyl-9H-purin-6-yl)amino)propyl)phenol | null | CC[C@H](CO)Nc1nc(NCCCc2cccc(O)c2)c2ncn(C(C)C)c2n1 | WREYDFZOQPABSD-MRXNPFEDSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 571 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | WREYDFZOQPABSD-MRXNPFEDSA-N | OPSIN | WREYDFZOQPABSD |
AUTOTPD-MG-000032 | 10.1038/s41467-024-50642-0 | LL-K12-18 | 1-(4-(6-(((5,6-dichloro-1H-benzo[d]imidazol-2-yl)methyl)amino)-9-ethyl-9H-purin-2-yl)piperazin-1-yl)-2-(diethylamino)ethan-1-one | null | CCN(CC)CC(=O)N1CCN(c2nc(NCc3nc4cc(Cl)c(Cl)cc4[nH]3)c3ncn(CC)c3n2)CC1 | OTSBHVNFWKVPMY-UHFFFAOYSA-N | OPSIN | cyclin K (CCNK) | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1 (CRL4-RBX1 E3 ligase) | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | western blot | Western blot | MDA-MB-231 | MDA-MB-231 | CVCL_0062 | null | Homo sapiens | 0.38 | nM | null | null | null | null | null | null | null | null | null | null | null | null | null | null | OTSBHVNFWKVPMY-UHFFFAOYSA-N | OPSIN | OTSBHVNFWKVPMY |
AUTOTPD-MG-000033 | 10.1038/s41589-024-01668-4 | MMH2 | tert-butyl (S)-2-(2,3,9-trimethyl-4-(4-(vinylsulfonamido)phenyl)-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetate | null | C=CS(=O)(=O)Nc1ccc(C2=N[C@@H](CC(=O)OC(C)(C)C)c3nnc(C)n3-c3sc(C)c(C)c32)cc1 | FZRRESXAODIMQN-IBGZPJMESA-N | OPSIN | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | DCAF16 (CRL4DCAF16) | DCAF16 | Q9NXF7 | MGPRNPSPDHLSESESEEEENISYLNESSGEEWDSSEEEDSMVPNLSPLESLAWQVKCLLKYSTTWKPLNPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPKLEPIPEWPPLASCGVPPFQKPLTSPSRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCGWLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL | Flow cytometry reporter assay (BRD4BD2-eGFP) measuring eGFP/mCherry ratio | Flow cytometry | K562 | K-562 | CVCL_0004 | null | Homo sapiens | 1 | nM | 16 | ~ | null | null | 95 | 16 | ~ | null | null | null | null | null | null | null | FZRRESXAODIMQN-IBGZPJMESA-N | OPSIN | FZRRESXAODIMQN |
AUTOTPD-MG-000034 | 10.1038/s41589-024-01668-4 | MMH1 | tert-butyl (S)-2-(4-(4-acrylamidophenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetate | null | C=CC(=O)Nc1ccc(C2=N[C@@H](CC(=O)OC(C)(C)C)c3nnc(C)n3-c3sc(C)c(C)c32)cc1 | AEEGEVCKDJFBRN-IBGZPJMESA-N | OPSIN | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | DCAF16 (CRL4DCAF16) | DCAF16 | Q9NXF7 | MGPRNPSPDHLSESESEEEENISYLNESSGEEWDSSEEEDSMVPNLSPLESLAWQVKCLLKYSTTWKPLNPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPKLEPIPEWPPLASCGVPPFQKPLTSPSRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCGWLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL | Flow cytometry reporter assay (BRD4BD2-eGFP) measuring eGFP/mCherry ratio | Flow cytometry | K562 | K-562 | CVCL_0004 | null | Homo sapiens | 1 | nM | 16 | ~ | null | null | 95 | 16 | ~ | null | null | null | null | null | null | null | AEEGEVCKDJFBRN-IBGZPJMESA-N | OPSIN | AEEGEVCKDJFBRN |
AUTOTPD-MG-000035 | 10.1038/s41589-024-01668-4 | TMX1 | tert-butyl (S,E)-2-(2,3,9-trimethyl-4-(4-(3-oxoprop-1-en-1-yl)phenyl)-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetate | null | Cc1sc2c(c1C)C(c1ccc(C=CC=O)cc1)=N[C@@H](CC(=O)OC(C)(C)C)c1nnc(C)n1-2 | SJISOGWQGIVAGX-FQEVSTJZSA-N | OPSIN | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | DCAF16 (CRL4DCAF16) | DCAF16 | Q9NXF7 | MGPRNPSPDHLSESESEEEENISYLNESSGEEWDSSEEEDSMVPNLSPLESLAWQVKCLLKYSTTWKPLNPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPKLEPIPEWPPLASCGVPPFQKPLTSPSRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCGWLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL | Flow cytometry reporter assay (BRD4BD2-eGFP) measuring eGFP/mCherry ratio | Flow cytometry | K562 | K-562 | CVCL_0004 | null | Homo sapiens | null | null | null | null | null | null | 80 | 16 | ~ | null | null | null | null | null | null | null | SJISOGWQGIVAGX-FQEVSTJZSA-N | OPSIN | SJISOGWQGIVAGX |
AUTOTPD-MG-000036 | 10.1038/s41589-023-01409-z | DS08 | (R)-2-((9-isopropyl-6-((naphthalen-2-ylmethyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2ccc3ccccc3c2)c2ncn(C(C)C)c2n1 | WKFFSBIHJSFZMR-LJQANCHMSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 724 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | WKFFSBIHJSFZMR-LJQANCHMSA-N | OPSIN | WKFFSBIHJSFZMR |
AUTOTPD-MG-000037 | 10.1038/s41589-023-01409-z | DS69 | (R)-2-((9-isopropyl-6-((3-(6-methylpyridin-2-yl)propyl)amino)-9H-purin-2-yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCCCc2cccc(C)n2)c2ncn(C(C)C)c2n1 | IYNJPMYEAQNCBL-MRXNPFEDSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 217 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | IYNJPMYEAQNCBL-MRXNPFEDSA-N | OPSIN | IYNJPMYEAQNCBL |
AUTOTPD-MG-000038 | 10.1038/s41589-024-01668-4 | GNE11 | tert-butyl (S)-2-(4-(4-(3-aminoprop-1-yn-1-yl)phenyl)-2,3,9-trimethyl-6H-thieno[3,2-f][1,2,4]triazolo[4,3-a][1,4]diazepin-6-yl)acetate | null | Cc1sc2c(c1C)C(c1ccc(C#CCN)cc1)=N[C@@H](CC(=O)OC(C)(C)C)c1nnc(C)n1-2 | PMSPBUOYDPYDPF-FQEVSTJZSA-N | OPSIN | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | DCAF16 (CRL4DCAF16) | DCAF16 | Q9NXF7 | MGPRNPSPDHLSESESEEEENISYLNESSGEEWDSSEEEDSMVPNLSPLESLAWQVKCLLKYSTTWKPLNPNSWLYHAKLLDPSTPVHILREIGLRLSHCSHCVPKLEPIPEWPPLASCGVPPFQKPLTSPSRLSRDHATLNGALQFATKQLSRTLSRATPIPEYLKQIPNSCVSGCCCGWLTKTVKETTRTEPINTTYSYTDFQKAVNKLLTASL | Flow cytometry reporter assay (BRD4BD2-eGFP) measuring eGFP/mCherry ratio | Flow cytometry | K562 | K-562 | CVCL_0004 | null | Homo sapiens | null | null | null | null | null | null | 50 | 16 | ~ | null | null | null | null | null | null | null | PMSPBUOYDPYDPF-FQEVSTJZSA-N | OPSIN | PMSPBUOYDPYDPF |
AUTOTPD-MG-000039 | 10.1038/s41589-023-01409-z | WX4 | (R)-2-((6-(((4-(1,3-dioxolan-2-yl)-[2,2'-bipyridin]-5-yl)methyl)amino)-9-isopropyl-9H-purin-2 yl)amino)butan-1-ol | null | CC[C@H](CO)Nc1nc(NCc2cnc(-c3ccccn3)cc2C2OCCO2)c2ncn(C(C)C)c2n1 | JTQIVHHWKGMCSQ-GOSISDBHSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 365 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | JTQIVHHWKGMCSQ-GOSISDBHSA-N | OPSIN | JTQIVHHWKGMCSQ |
AUTOTPD-MG-000040 | 10.1038/s41589-023-01409-z | WX3 | (R)-6'-(((2-((1-hydroxybutan-2-yl)amino)-9-isopropyl-9H-purin-6-yl)amino)methyl)-[2,3' bipyridin]-2'(1'H)-one | null | CC[C@H](CO)Nc1nc(NCc2ccc(-c3ccccn3)c(=O)[nH]2)c2ncn(C(C)C)c2n1 | ZZMGLCCXIBNSGN-OAHLLOKOSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 23 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | ZZMGLCCXIBNSGN-OAHLLOKOSA-N | OPSIN | ZZMGLCCXIBNSGN |
AUTOTPD-MG-000041 | 10.1038/s41589-023-01409-z | DS74 | N-((5,6-dichloro-1H-benzo[d]imidazol-2-yl)methyl)-8-(1-methyl-1H-pyrazol-4-yl)-2 morpholinopyrazolo[1,5-a][1,3,5]triazin-4-amine | null | Cn1cc(-c2cnn3c(NCc4nc5cc(Cl)c(Cl)cc5[nH]4)nc(N4CCOCC4)nc23)cn1 | RSUMIRUUOWUKDK-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 51 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | RSUMIRUUOWUKDK-UHFFFAOYSA-N | OPSIN | RSUMIRUUOWUKDK |
AUTOTPD-MG-000042 | 10.1038/s41589-023-01409-z | DS73 | 8-bromo-N-((5,6-dimethyl-1H-benzo[d]imidazol-2-yl)methyl)-2-(4-methylpiperazin-1 yl)pyrazolo[1,5-a][1,3,5]triazin-4-amine | null | Cc1cc2nc(CNc3nc(N4CCN(C)CC4)nc4c(Br)cnn34)[nH]c2cc1C | PGDRKKXMPSPTSV-UHFFFAOYSA-N | OPSIN | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 1 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | PGDRKKXMPSPTSV-UHFFFAOYSA-N | OPSIN | PGDRKKXMPSPTSV |
AUTOTPD-MG-000043 | 10.1021/acs.jmedchem.9b02076 | 27b | 5-((5-chloro-2-(4,4-difluoropiperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(F)(F)CC4)ncc3Cl)ccc21 | WBWCRVDICXCMSW-UHFFFAOYSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | MSD assay | MSD | OCI-Ly1 | OCI-Ly1 | CVCL_1879 | null | Homo sapiens | null | null | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | WBWCRVDICXCMSW-UHFFFAOYSA-N | OPSIN | WBWCRVDICXCMSW |
AUTOTPD-MG-000044 | 10.1021/acs.jmedchem.9b02076 | 27b | 5-((5-chloro-2-(4,4-difluoropiperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(F)(F)CC4)ncc3Cl)ccc21 | WBWCRVDICXCMSW-UHFFFAOYSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | MSD assay | MSD | Karpas 422 | Karpas-422 | CVCL_1325 | null | Homo sapiens | null | null | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | WBWCRVDICXCMSW-UHFFFAOYSA-N | OPSIN | WBWCRVDICXCMSW |
AUTOTPD-MG-000045 | 10.1021/acs.jmedchem.9b02076 | 27e | 5-((5-chloro-2-(4,4-difluoro-3-(hydroxymethyl)piperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(F)(F)C(CO)C4)ncc3Cl)ccc21 | AXXSGZFGJNDDCH-UHFFFAOYSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | MSD assay | MSD | OCI-Ly1 | OCI-Ly1 | CVCL_1879 | null | Homo sapiens | null | null | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | AXXSGZFGJNDDCH-UHFFFAOYSA-N | OPSIN | AXXSGZFGJNDDCH |
AUTOTPD-MG-000046 | 10.1021/acs.jmedchem.9b02076 | 27e | 5-((5-chloro-2-(4,4-difluoro-3-(hydroxymethyl)piperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(F)(F)C(CO)C4)ncc3Cl)ccc21 | AXXSGZFGJNDDCH-UHFFFAOYSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | MSD assay | MSD | Karpas 422 | Karpas-422 | CVCL_1325 | null | Homo sapiens | null | null | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | AXXSGZFGJNDDCH-UHFFFAOYSA-N | OPSIN | AXXSGZFGJNDDCH |
AUTOTPD-MG-000047 | 10.1021/acs.jmedchem.9b02076 | 27e | 5-((5-chloro-2-(4,4-difluoro-3-(hydroxymethyl)piperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCC(F)(F)C(CO)C4)ncc3Cl)ccc21 | AXXSGZFGJNDDCH-UHFFFAOYSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | immunofluorescence assay | Fluorescence imaging | SU-DHL-4 | SU-DHL-4 | CVCL_0539 | null | Homo sapiens | null | null | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | AXXSGZFGJNDDCH-UHFFFAOYSA-N | OPSIN | AXXSGZFGJNDDCH |
AUTOTPD-MG-000048 | 10.1021/acs.jmedchem.9b02076 | 27d | 5-((5-chloro-2-(3-(hydroxymethyl)piperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | Cn1c(=O)n(CCC(C)(C)O)c2cc(Nc3nc(N4CCCC(CO)C4)ncc3Cl)ccc21 | QDLVANQUFIRAGS-UHFFFAOYSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | immunofluorescence assay | Fluorescence imaging | SU-DHL-4 | SU-DHL-4 | CVCL_0539 | null | Homo sapiens | null | null | null | null | null | null | 60 | null | ~ | null | null | null | null | null | null | null | QDLVANQUFIRAGS-UHFFFAOYSA-N | OPSIN | QDLVANQUFIRAGS |
AUTOTPD-MG-000049 | 10.1021/acs.jmedchem.9b02076 | 1 | 5-((5-chloro-2-((3R,5S)-4,4-difluoro-3,5-dimethylpiperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C[C@H](C)C1(F)F | VFNPUAOAEFMXQI-GASCZTMLSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | MSD assay | MSD | Karpas 422 | Karpas-422 | CVCL_1325 | null | Homo sapiens | null | null | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | VFNPUAOAEFMXQI-GASCZTMLSA-N | OPSIN | VFNPUAOAEFMXQI |
AUTOTPD-MG-000050 | 10.1021/acs.jmedchem.9b02076 | 1 | 5-((5-chloro-2-((3R,5S)-4,4-difluoro-3,5-dimethylpiperidin-1-yl)pyrimidin-4-yl)amino)-3-(3-hydroxy-3-methylbutyl)-1-methyl-1,3-dihydro-2H-benzo[d]imidazol-2-one | null | C[C@@H]1CN(c2ncc(Cl)c(Nc3ccc4c(c3)n(CCC(C)(C)O)c(=O)n4C)n2)C[C@H](C)C1(F)F | VFNPUAOAEFMXQI-GASCZTMLSA-N | OPSIN | BCL6 | BCL6 | P41182 | null | MASPADSCIQFTRHASDVLLNLNRLRSRDILTDVVIVVSREQFRAHKTVLMACSGLFYSIFTDQLKCNLSVINLDPEINPEGFCILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRKFIKASEAEMVSAIKPPREEFLNSRMLMPQDIMAYRGREVVENNLPLRSAPGCESRAFAPSLYSGLSTPPASYSMYSHLPVSSLLFSDEEFRDVRMPVANPFPKERALPCDSARPVPGEYSRPTLEVSPNVCHSNIYSPKETIPEEARSDMHYSVAEGLKPAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPN... | null | null | null | null | MSD assay | MSD | OCI-Ly1 | OCI-Ly1 | CVCL_1879 | null | Homo sapiens | 1.1 | nM | null | null | null | null | 85 | null | > | null | null | null | null | null | null | null | VFNPUAOAEFMXQI-GASCZTMLSA-N | OPSIN | VFNPUAOAEFMXQI |
AUTOTPD-MG-000051 | 10.1021/acs.jmedchem.3c00851 | dBET57 | 2-[(9S)-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.02,6]trideca-2(6),4,7,10,12-pentaen-9-yl]-N-[2-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]ethyl]acetamide | PUBCHEM | Cc1sc2c(c1C)C(c1ccc(Cl)cc1)=N[C@@H](CC(=O)NCCNc1cccc3c1C(=O)N(C1CCC(=O)NC1=O)C3=O)c1nnc(C)n1-2 | CZRLOIDJCMKJHE-UXMRNZNESA-N | PAPER | BRD4 | BRD4 | O60885 | null | MSAESGPGTRLRNLPVMGDGLETSQMSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKETGTAKPGVSTVPNTTQASTPPQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLPPEPKTTKLGQ... | CRBN | CRBN | Q96SW2 | MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS... | Western blot densitometry | Western blot | MOLT4 | MOLT-4 | CVCL_0013 | null | Homo sapiens | 11 | nM | 24 | null | null | null | null | null | null | null | null | null | null | null | null | null | CZRLOIDJCMKJHE-UXMRNZNESA-N | PUBCHEM | CZRLOIDJCMKJHE |
AUTOTPD-MG-000052 | 10.1021/acs.jmedchem.3c00851 | A6 | 4-[8-[[2-[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]oxyacetyl]amino]octanoylamino]-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide | PUBCHEM | O=C(CCCCCCNC(=O)c1ccc(NC(=O)CCCCCCCNC(=O)COc2cccc3c2C(=O)N(C2CCC(=O)NC2=O)C3=O)cc1)NO | FQLCLMHMOFLVSV-UHFFFAOYSA-N | PAPER | HDAC6 | HDAC6 | Q9UBN7 | null | MTSTGQDSTTTRQRRSRQNPQSPPQDSSVTSKRNIKKGAVPRSIPNLAEVKKKGKMKKLGQAMEEDLIVGLQGMDLNLEAEALAGTGLVLDEQLNEFHCLWDDSFPEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVLGAEIRNGMAIIRPPGHHAQHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHRYEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYI... | CRBN | CRBN | Q96SW2 | MAGEGDQQDAAHNMGNHLPLLPAESEEEDEMEVEDQDSKEAKKPNIINFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLPQVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVQEREAQFGTTAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMSAVQLESLNKCQIFPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMDRIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS... | Western blot densitometry | Western blot | MM.1S | MM1.S | CVCL_8792 | null | Homo sapiens | 6.5 | nM | 24 | null | null | null | null | null | null | null | null | null | null | null | null | null | FQLCLMHMOFLVSV-UHFFFAOYSA-N | PUBCHEM | FQLCLMHMOFLVSV |
AUTOTPD-MG-000053 | 10.1038/s41589-023-01409-z | DS02 | (2R)-2-[[6-(5-phenylpentylamino)-9-propan-2-ylpurin-2-yl]amino]butan-1-ol | PUBCHEM | CC[C@H](CO)Nc1nc(NCCCCCc2ccccc2)c2ncn(C(C)C)c2n1 | KLBKESYFUKKKSS-LJQANCHMSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 1,775 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | KLBKESYFUKKKSS-LJQANCHMSA-N | PUBCHEM | KLBKESYFUKKKSS |
AUTOTPD-MG-000054 | 10.1038/s41589-023-01409-z | DS66 | (2R)-2-[[6-[3-(3,4-dimethylphenyl)propylamino]-9-propan-2-ylpurin-2-yl]amino]butan-1-ol | PUBCHEM | CC[C@H](CO)Nc1nc(NCCCc2ccc(C)c(C)c2)c2ncn(C(C)C)c2n1 | CWXUALXYQXQCPS-LJQANCHMSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 88 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | CWXUALXYQXQCPS-LJQANCHMSA-N | PUBCHEM | CWXUALXYQXQCPS |
AUTOTPD-MG-000055 | 10.1101/2024.07.10.602857 | iDeg-6 | null | null | null | null | null | IDO1 | IDO1 | P14902 | null | MAHAMENSWTISKEYHIDEEVGFALPNPQENLPDFYNDWMFIAKHLPDLIESGQLRERVEKLNMLSIDHLTDHKSQRLARLVLGCITMAYVWGKGHGDVRKVLPRNIAVPYCQLSKKLELPPILVYADCVLANWKKKDPNKPLTYENMDVLFSFRDGDCSKGFFLVSLLVEIAAASAIKVIPTVFKAMQMQERDTLLKALLEIASCLEKALQVFHQIHDHVNPKAFFSVLRIYLSGWKGNPQLSDGLVYEGFWEDPKEFAGGSAGQSSVFQCFDVLLGIQQTAGGGHAAQFLQDMRRYMPPAHRNFLCSLESNPSVREFV... | CRL2KLHDC3 | KLHDC3 | Q9BQ90 | MLRWTVHLEGGPRRVNHAAVAVGHRVYSFGGYCSGEDYETLRQIDVHIFNAVSLRWTKLPPVKSAIRGQAPVVPYMRYGHSTVLIDDTVLLWGGRNDTEGACNVLYAFDVNTHKWFTPRVSGTVPGARDGHSACVLGKIMYIFGGYEQQADCFSNDIHKLDTSTMTWTLICTKGSPARWRDFHSATMLGSHMYVFGGRADRFGPFHSNNEIYCNRIRVFDTRTEAWLDCPPTPVLPEGRRSHSAFGYNGELYIFGGYNARLNRHFHDLWKFNPVSFTWKKIEPKGKGPCPRRRQCCCIVGDKIVLFGGTSPSPEEGLGDE... | immunoblot (western blot) quantification of IDO1 protein levels | Western blot | BxPC3 | BxPC-3 | CVCL_0186 | null | Homo sapiens | 6.5 | nM | 24 | null | 3.5 | 9.5 | 70 | 24 | null | null | null | 100 | null | null | null | nM | null | null | null |
AUTOTPD-MG-000056 | 10.1038/s41589-023-01409-z | DS47 | (2S)-5-(carbamoylamino)-N-[4-(hydroxymethyl)phenyl]-2-[[(2S)-3-methyl-2-[[9-propan-2-yl-6-[(4-pyridin-2-ylphenyl)methylamino]purin-2-yl]amino]butanoyl]amino]pentanamide | PUBCHEM | CC(C)[C@H](Nc1nc(NCc2ccc(-c3ccccn3)cc2)c2ncn(C(C)C)c2n1)C(=O)N[C@@H](CCCNC(N)=O)C(=O)Nc1ccc(CO)cc1 | LVVKHGPMCAECNF-CONSDPRKSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 4,390 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | LVVKHGPMCAECNF-CONSDPRKSA-N | PUBCHEM | LVVKHGPMCAECNF |
AUTOTPD-MG-000057 | 10.1038/s41589-023-01409-z | Z10 | null | null | null | null | null | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 219 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
AUTOTPD-MG-000058 | 10.1038/s41589-023-01409-z | DS_CR8 | null | null | null | null | null | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 55 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
AUTOTPD-MG-000059 | 10.1038/s41589-023-01409-z | THAL-SNS032 | N-[5-[(5-tert-butyl-1,3-oxazol-2-yl)methylsulfanyl]-1,3-thiazol-2-yl]-1-[2-[2-[2-[2-[2-[[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]amino]ethoxy]ethoxy]ethoxy]ethylamino]-2-oxoethyl]piperidine-4-carboxamide | PUBCHEM | CC(C)(C)c1cnc(CSc2cnc(NC(=O)C3CCN(CC(=O)NCCOCCOCCOCCNc4cccc5c4C(=O)N(C4CCC(=O)NC4=O)C5=O)CC3)s2)o1 | BXDZOYLPNAIDOC-UHFFFAOYSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 50 | nM | 5 | < | null | null | null | null | null | null | null | null | null | null | null | null | BXDZOYLPNAIDOC-UHFFFAOYSA-N | PUBCHEM | BXDZOYLPNAIDOC |
AUTOTPD-MG-000060 | 10.1038/s41589-023-01409-z | Z12 | null | null | null | null | null | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 3,492 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
AUTOTPD-MG-000061 | 10.1038/s41589-023-01409-z | BSJ-4-116 | N-[7-[(3R)-3-[[5-chloro-4-(2-propan-2-ylsulfonylanilino)pyrimidin-2-yl]amino]piperidin-1-yl]heptyl]-2-[2-(2,6-dioxopiperidin-3-yl)-1,3-dioxoisoindol-4-yl]oxyacetamide | PUBCHEM | CC(C)S(=O)(=O)c1ccccc1Nc1nc(N[C@@H]2CCCN(CCCCCCCNC(=O)COc3cccc4c3C(=O)N(C3CCC(=O)NC3=O)C4=O)C2)ncc1Cl | YJOJMGTVKMABKQ-FIQOPJFZSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 155 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | YJOJMGTVKMABKQ-FIQOPJFZSA-N | PUBCHEM | YJOJMGTVKMABKQ |
AUTOTPD-MG-000062 | 10.1038/s41589-023-01409-z | 21195 | null | null | null | null | null | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 26 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
AUTOTPD-MG-000063 | 10.1038/s41589-023-01409-z | SR-4835 | N-[(5,6-dichloro-1H-benzimidazol-2-yl)methyl]-9-(1-methylpyrazol-4-yl)-2-morpholin-4-ylpurin-6-amine | PUBCHEM | Cn1cc(-n2cnc3c(NCc4nc5cc(Cl)c(Cl)cc5[nH]4)nc(N4CCOCC4)nc32)cn1 | FSELUFUYNUNZKD-UHFFFAOYSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 14 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | FSELUFUYNUNZKD-UHFFFAOYSA-N | PUBCHEM | FSELUFUYNUNZKD |
AUTOTPD-MG-000064 | 10.1038/s41589-023-01409-z | 919278 | null | null | null | null | null | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 176 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null | null |
AUTOTPD-MG-000065 | 10.1038/s41589-023-01409-z | dCeMM2 | N-(5-chloro-2-pyridinyl)-2-(5H-[1,2,4]triazino[5,6-b]indol-3-ylsulfanyl)acetamide | PUBCHEM | O=C(CSc1nnc2c(n1)[nH]c1ccccc12)Nc1ccc(Cl)cn1 | VFWVTIHYVUKNGR-UHFFFAOYSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 633 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | VFWVTIHYVUKNGR-UHFFFAOYSA-N | PUBCHEM | VFWVTIHYVUKNGR |
AUTOTPD-MG-000066 | 10.1038/s41589-023-01409-z | dCeMM4 | 3-(5-methylfuran-2-carbonyl)-N-(5-methyl-1,3-thiazol-2-yl)-1,3-thiazolidine-4-carboxamide | PUBCHEM | Cc1ccc(C(=O)N2CSCC2C(=O)Nc2ncc(C)s2)o1 | BPWZJVKIVHVVHP-UHFFFAOYSA-N | PUBCHEM | cyclin K | CCNK | O75909 | null | MKENKENSSPSVTSANLDHTKPCWYWDKKDLAHTPSQLEGLDPATEARYRREGARFIFDVGTRLGLHYDTLATGIIYFHRFYMFHSFKQFPRYVTGACCLFLAGKVEETPKKCKDIIKTARSLLNDVQFGQFGDDPKEEVMVLERILLQTIKFDLQVEHPYQFLLKYAKQLKGDKNKIQKLVQMAWTFVNDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLEDICHQILDLYSQGKQQMPHHTPHQLQQPPSLQPTPQVPQVQQSQPSQSSEPSQPQQKDPQQPAQQQQPAQQP... | DDB1–CUL4–RBX1 | DDB1 | Q16531 | MSYNYVVTAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELFRPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPECRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQGRHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLAIAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGETSIAECLTYLDNG... | HEK293T cyclin K–eGFP reporter assay | Fluorescent reporter | HEK293T–Cas9 | HEK293T | CVCL_0063 | null | Homo sapiens | 1,210 | nM | 5 | null | null | null | null | null | null | null | null | null | null | null | null | null | BPWZJVKIVHVVHP-UHFFFAOYSA-N | PUBCHEM | BPWZJVKIVHVVHP |
AutoTPD+ is a living database of PROTAC and molecular glue degradation assays mined from the literature using an agentic LLM workflow.
It contains standardized compound, target, recruiter, assay, cell-line, DC50, and Dmax information. AutoTPD+ combines literature extracted records with PROTAC-DB 3.0 and MolGlueDB and is designed for monthly updates.
| File | Description | Records |
|---|---|---|
AutoTPDplus-PROTAC.csv |
Living PROTAC dataset | 6,766 |
AutoTPDplus-MG.csv |
Living molecular glue dataset | 856 |
AutoTPD-PROTAC.csv |
Frozen PROTAC benchmark | 714 |
AutoTPD-MG.csv |
Frozen molecular glue benchmark | 246 |
Each row represents one degradation assay record.
| Column | Description |
|---|---|
| IDENTIFIERS | |
AutoTPD_ID |
Stable row identifier, unchanged across monthly releases |
Record_ID |
Record ID in the source database; empty for LLM-extracted records |
Compound_ID |
Compound ID in the source database; empty for LLM-extracted records |
DOI |
Source publication |
| COMPOUND | |
Compound_Name |
Compound name or label as reported in the paper |
IUPAC_Name |
IUPAC name |
IUPAC_Name_Source |
Where the IUPAC name came from (PAPER, PUBCHEM) |
SMILES |
RDKit canonical SMILES |
SMILES_Source |
Where the SMILES came from (PAPER, PUBCHEM, OPSIN, source database) |
StdInChIKey |
Standard InChIKey computed by RDKit from the standardized canonical SMILES |
Connectivity_Key |
First block of the InChIKey (connectivity only, ignores stereochemistry) |
| DEGRADATION TARGET | |
Degradation_Target |
Target as reported in the paper |
Degradation_Target_Gene |
HGNC gene symbol |
Degradation_Target_Uniprot |
UniProt accession |
Degradation_Target_Uniprot_MutationID |
UniProt variant ID when a specific mutant is targeted |
Degradation_Target_Sequence |
UniProt protein sequence |
| RECRUITER | |
Recruiter |
Recruiter (usually an E3 ligase) as reported |
Recruiter_Gene |
Gene symbol |
Recruiter_Uniprot |
UniProt accession |
Recruiter_Sequence |
UniProt protein sequence |
| ASSAY CONTEXT | |
Assay |
Assay as described in the paper |
Assay_STD |
Standardized assay family |
Cell_Line |
Cell line as reported, or cell-free |
Cell_Line_STD |
Cellosaurus recommended name |
Cell_Line_STD_Accession |
Cellosaurus accession (RRID) |
Cell_Line_Modification |
Engineered construct, e.g. a HiBiT knock-in |
Cell_Line_Species |
Species of the cell line |
| DC50 | |
DC50 |
Concentration giving 50% degradation |
DC50_units |
Units of DC50 |
DC50_h |
Treatment time in hours |
DC50_operator |
Qualifier: <, >, ~, <=, >= |
DC50_range_min |
Range low end, or mean − error |
DC50_range_max |
Range high end, or mean + error |
| DMAX | |
Dmax |
Maximal degradation, in % |
Dmax_h |
Treatment time in hours |
Dmax_operator |
Qualifier: <, >, ~, <=, >= |
Dmax_range_min |
Range low end, or mean − error |
Dmax_range_max |
Range high end, or mean + error |
| DMAX CONCENTRATION | |
Dmax_conc |
Concentration at which Dmax was measured |
Dmax_conc_units |
Units of Dmax_conc |
Dmax_conc_operator |
Qualifier for Dmax_conc |
Dmax_conc_range_min |
Range low end |
Dmax_conc_range_max |
Range high end |
from datasets import load_dataset
protac = load_dataset(
"ailab-bio/AutoTPDplus",
"autotpdplus-protac",
token=True,
)
molecular_glue = load_dataset(
"ailab-bio/AutoTPDplus",
"autotpdplus-mg",
token=True,
)
@misc{rao2026agenticliteratureextractionaugments,
title={Agentic Literature Extraction Augments Targeted Protein Degradation Databases},
author={Yaochen Rao and Farzaneh Jalalypour and N. M. Anoop Krishnan and Rocío Mercado},
year={2026},
eprint={2605.11221},
archivePrefix={arXiv},
primaryClass={q-bio.QM},
url={https://arxiv.org/abs/2605.11221},
}
The structured datasets are released under CC BY 4.0. Original publications, PROTAC-DB, MolGlueDB, and other upstream resources remain subject to their respective licenses.